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SRX083223: GSM759664: FoxA1_ChIP-seq_siFoxA1_rep2
1 ILLUMINA (Illumina Genome Analyzer) run: 7.6M spots, 227.5M bases, 143.8Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Dual Role of FoxA1 in Androgen Receptor Binding to Chromatin, Androgen Signaling and Prostate Cancer [ChIP_seq, DHS_seq]
show Abstracthide Abstract
We report the dual role of FoxA1 in androgen receptor recruitment to the chromatin of androgen responsive prostate cancer cell line LNCaP-1F5 using ChIP-sequencing. Depletion of FoxA1 reprograms both androgen and glucocorticoid receptor recruitment and subsequent gene expression. The ChIP-seq has been performed using AR, FoxA1, GR, H3K4me2 antibodies. We have also mapped the DNaseI-hypersensitive sites (DHS) using deep sequencing. Overall design: Examination of AR, FoxA1, GR, H3K4me2 binding sites and DHS sites in parental and FoxA1 depleted LNCaP-1F5 cells.
Sample: FoxA1_ChIP-seq_siFoxA1_rep2
SAMN00668262 • SRS227926 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM759664: FoxA1_ChIP-seq_siFoxA1_rep2
Instrument: Illumina Genome Analyzer
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Spot descriptor:
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Experiment attributes:
GEO Accession: GSM759664
Links:
External link:
Runs: 1 run, 7.6M spots, 227.5M bases, 143.8Mb
Run# of Spots# of BasesSizePublished
SRR3091967,584,859227.5M143.8Mb2011-09-16

ID:
94183

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